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# CITATION.cff file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "MALDIassist" in publications use:'
type: software
license: MIT
title: 'MALDIassist: Mathematical Utilities for MALDI-TOF Mass Spectrometry'
version: 1.0.2
identifiers:
- type: doi
  value: 10.32614/CRAN.package.MALDIassist
abstract: Supports matrix-assisted laser desorption/ionization time-of-flight (MALDI-TOF)
  mass spectrometry workflows from raw Bruker spectra to cohort-level peak matrices.
  Provides spectrum loading, Savitzky-Golay smoothing, baseline correction (SNIP and
  TopHat), Gaussian kernel-regression-based peak detection including shoulder peaks,
  peak-quality assessment, filtering, and cohort feature analysis. Computationally
  intensive routines are implemented in C++ using 'Rcpp'. The implemented signal-processing
  methods include those described by Savitzky and Golay (1964) <https://doi.org/10.1021/ac60214a047>,
  Ryan et al. (1988) <https://doi.org/10.1016/0168-583X(88)90063-8>, Stanford, Bagley
  and Solomon (2016) <https://doi.org/10.1186/s12953-016-0107-8>, and Nadaraya-Watson
  kernel regression (Nadaraya (1964) <https://doi.org/10.1137/1109020>; Watson (1964)
  <https://www.jstor.org/stable/25049340>).
authors:
- family-names: Oh
  given-names: Wonseok
  email: hiows97@gmail.com
  orcid: https://orcid.org/0009-0002-0687-8466
preferred-citation:
  type: manual
  title: 'MALDIassist: Mathematical Utilities for MALDI-TOF Mass Spectrometry'
  authors:
  - family-names: Oh
    given-names: Wonseok
    orcid: https://orcid.org/0009-0002-0687-8466
    email: hiows97@gmail.com
  year: '2026'
  notes: R package version 1.0.2
  url: https://github.com/hiows/MALDIassist
repository: https://hiows.r-universe.dev
repository-code: https://github.com/hiows/MALDIassist
commit: e1779d9cf68b76158ed19bea70ab8ebfc886345d
url: https://github.com/hiows/MALDIassist
date-released: '2026-07-24'
contact:
- family-names: Oh
  given-names: Wonseok
  email: hiows97@gmail.com
  orcid: https://orcid.org/0009-0002-0687-8466